Package: IsoCor 0.2.9
IsoCor: Analyze Isotope Ratios in a 'Shiny'-App
Analyzing Inductively Coupled Plasma - Mass Spectrometry (ICP-MS) measurement data to evaluate isotope ratios (IRs) is a complex process. The 'IsoCor' package facilitates this process and renders it reproducible by providing a function to run a 'Shiny'-App locally in any web browser. In this App the user can upload data files of various formats, select ion traces, apply peak detection and perform calculation of IRs and delta values. Results are provided as figures and tables and can be exported. The App, therefore, facilitates data processing of ICP-MS experiments to quickly obtain optimal processing parameters compared to traditional 'Excel' worksheet based approaches. A more detailed description can be found in the corresponding article <doi:10.1039/D2JA00208F>. The most recent version of 'IsoCor' can be tested online at <https://apps.bam.de/shn00/IsoCor/>.
Authors:
IsoCor_0.2.9.tar.gz
IsoCor_0.2.9.zip(r-4.7-any)IsoCor_0.2.9.zip(r-4.6-any)IsoCor_0.2.9.zip(r-4.5-any)
IsoCor_0.2.9.tgz(r-4.6-any)IsoCor_0.2.9.tgz(r-4.5-any)
IsoCor_0.2.9.tar.gz(r-4.7-any)IsoCor_0.2.9.tar.gz(r-4.6-any)
IsoCor_0.2.9.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
IsoCor/json (API)
| # Install 'IsoCor' in R: |
| install.packages('IsoCor', repos = c('https://janlisec.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/janlisec/isocor/issues
- isotopes - Isotopes.
- testdata - Testdata.
- testdata_IDMS - Testdata_IDMS.
Last updated from:f0f12d44a3. Checks:7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | NOTE | 140 | ||
| source / vignettes | OK | 193 | ||
| linux-release | NOTE | 175 | ||
| macos-release | NOTE | 109 | ||
| macos-oldrel | NOTE | 104 | ||
| windows-devel | NOTE | 92 | ||
| windows-release | NOTE | 94 | ||
| windows-oldrel | NOTE | 80 | ||
| wasm-release | OK | 129 |
Exports:find_peak_boundariesic_appiso_ratiomass_biasread_raw_data
Dependencies:attemptbase64encbslibcachemclicodetoolscommonmarkconfigcrosstalkdigestDTevaluatefastmapfontawesomefsgluegolemhighrhtmltoolshtmlwidgetshttpuvjquerylibjsonliteknitrlaterlazyevallifecyclelitedownmagrittrMALDIquantmarkdownmemoisemimeotelpromisesR6rappdirsRcpprlangrmarkdownsassshinyshinyalertshinyjssourcetoolstinytexuuidwithrxfunxtableyaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| find_peak_boundaries | find_peak_boundaries |
| ic_app. | ic_app |
| iso_ratio | iso_ratio |
| isotopes. | isotopes |
| mass_bias. | mass_bias |
| read_raw_data | read_raw_data |
| testdata. | testdata |
| testdata_IDMS. | testdata_IDMS |